Spoilage organisms

A range of microbes can cause postharvest disease on vegetables. Some are bacteria but most are fungi. 

Many bacteria and fungi can cause postharvest disease on fruit and vegetables. The most important postharvest pathogens of vegetables are the fungi Alternaria, Botrytis, Fusarium, Rhizopus and Sclerotinia. Erwinia, the cause of soft rots, is the main bacteria affecting vegetables. Bacterial rots are more likely to develop on vegetables than on fruit because they usually have a pH >4.5, which favours bacteria. 

Main postharvest pathogens affecting vegetables 
Pathogen Disease Vegetables affected
Albugo candida White rust Asian leafy, broccoli, rocket, spinach
Alternaria alternata,
Alternaria
spp.
Black rot, Alternaria
spot, black spot
Bean, broccoli, cabbage, capsicum, carrot, cauliflower, cucumber, eggplant, onion, pea, squash, sweet corn, sweetpotato, tomato
Aspergillus niger Black rot Onion, sweet corn, tomato
Botrytis allii Neck rot Onion, shallot
Botrytis cinerea Grey mould

ANY, but particularly bean, broccoli, cabbage, capsicum, carrot, cauliflower, cucumber, eggplant, lettuce, onion, pea, pumpkin, squash, sweet corn, sweetpotato, tomato

Colletotrichum spp. Anthracnose Bean, capsicum, cucumber, eggplant, pumpkin, squash, tomato

Erwinia carotovora,
Erwinia
spp.

Bacterial soft rot ANY, but particularly bean, broccoli, cabbage, capsicum, carrot, cauliflower, celery, cucumber, lettuce, onion, pea, potato, pumpkin, spinach, squash, sweetpotato, tomato
Fusarium spp. Soft rot Cabbage, capsicum, carrot, celery, eggplant, onion, potato, pumpkin, squash, sweet corn, sweetpotato
Pectobacterium
carotovorum
Bacterial soft rot Asian leafy, lettuce, cabbage, cauliflower
Penicillium spp. Blue mould Cucumber, tomato
Pseudomonas
syringae,
Pseudomonas
spp.
Bacterial spot Asian leafy, bean, broccoli, cabbage, cauliflower, celery, cucumber, lettuce, onion, pea, spinach, squash, tomato
Pythium
aphanidermatum
Cottony rot Bean, beetroot, cucumber
Rhizopus stolonifer Storage rot,
rhizopus rot
Bean, capsicum, carrot, cucumber, eggplant, pea, pumpkin, squash, sweetpotato, tomato
Sclerotinia
sclerotiorum
White rot, white
mould
Bean, broccoli, cabbage, carrot, cauliflower, celery, cucumber, eggplant, lettuce, onion, pea, pumpkin, squash
Thielaviopsis
basicola
Black root rot Carrot